{"id":351,"date":"2025-10-19T16:50:33","date_gmt":"2025-10-19T16:50:33","guid":{"rendered":"https:\/\/affiliate.wcu.edu\/boonelab\/?page_id=351"},"modified":"2025-10-28T02:04:04","modified_gmt":"2025-10-28T02:04:04","slug":"publications","status":"publish","type":"page","link":"https:\/\/affiliate.wcu.edu\/boonelab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"

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1. Liu, Y., Rajput, R., Islam, M.T., Valle, I.D., Yao, T., Agrawal, R., Boone, B.A., Eckert, C.A., Abraham, P.E., and Chen, J. (2025). A split ribozyme system for in vivo plant RNA imaging and genetic engineering. Plant Biotechnology Journal 23<\/i>, 1640\u20131649.<\/div>\n
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2. Boone, B.A., Ichino, L., Wang, S., Gardiner, J., Yun, J., Jami-Alahmadi, Y., Sha, J., Mendoza, C.P., Steelman, B.J., and van Aardenne, A. (2023). ACD15, ACD21, and SLN regulate the accumulation and mobility of MBD6 to silence genes and transposable elements. Science advances 9<\/i>, eadi9036.<\/div>\n
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3. Johnstone, A.L., Boone, B.A., Cowles, M.W., Bone, J.R., Sun, Z.-W., and Keogh, M.-C. Acyl-Modified Histone Binding Assay.<\/div>\n
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4. Picard, C.L., Ichino, L., Buckley, T.J., Boone, B.A., Abuhanna, K.D., Zhang, Y., Behrendt, N.J., May Lei Soe, S., Luo, C., and Jacobsen, S.E. (2025). An antagonistic epigenetic mechanism regulating gene expression in pollen revealed through single-nucleus multiomics. bioRxiv, 2025\u201310.<\/div>\n
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5. Shah, R.N., Grzybowski, A.T., Cornett, E.M., Johnstone, A.L., Dickson, B.M., Boone, B.A., Cheek, M.A., Cowles, M.W., Maryanski, D., and Meiners, M.J. (2019). Are your ChIP antibodies skewing your data?<\/div>\n
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6. Boone, B.A. (2024). Chaperone Proteins: Bridging Protein Accumulation with Epigenetic Mechanisms and Gene Regulation in Arabidopsis thaliana.<\/div>\n
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7. Shah, R.N., Grzybowski, A.T., Cornett, E.M., Johnstone, A.L., Dickson, B.M., Boone, B.A., Cheek, M.A., Cowles, M.W., Maryanski, D., and Meiners, M.J. (2018). Examining the roles of H3K4 methylation states with systematically characterized antibodies. Molecular cell 72<\/i>, 162\u2013177.<\/div>\n
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8. Wang, S., Wang, M., Ichino, L., Boone, B.A., Zhong, Z., Papareddy, R.K., Lin, E.K., Yun, J., Feng, S., and Jacobsen, S.E. (2024). MBD2 couples DNA methylation to transposable element silencing during male gametogenesis. Nature Plants 10<\/i>, 13\u201324.<\/div>\n
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9. Ichino, L., Boone, B.A., Strauskulage, L., Harris, C.J., Kaur, G., Gladstone, M.A., Tan, M., Feng, S., Jami-Alahmadi, Y., and Duttke, S.H. (2021). MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO. Science 372<\/i>, 1434\u20131439.<\/div>\n
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10. Rajput, R., Boone, B.A., Mandlik, R., Islam, M.T., Qi, Y., Wang, J., Barrangou, R., Sozzani, R., Eckert, C.A., and Tuskan, G.A. (2025). Multigene engineering in plants: Technologies, applications, and future prospects. Biotechnology Advances, 108697.<\/div>\n
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11. Marunde, M.R., Popova, I.K., Hall, N.W., Vaidya, A., Bone, J.R., Boone, B.A., Brown, P.J., Ezell, R.J., Firestone, T.M., and Fuchs, H.A. (2025). Nucleosome context regulates chromatin reader preference. bioRxiv, 2025\u201304.<\/div>\n
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12. Whelihan, M.F., Cowles, M.W., Boone, B.A., Sun, Z.-W., Bone, J.R., and Keogh, M.-C. Nucleosome Remodeling Assay by EpiDyneTM<\/sup>-FRET.<\/div>\n
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13. Liu, Y., Rajput, R., Islam, T., Del Valle, I., Yao, T., Agarwal, R., Boone, B.A., Eckert, C., Abraham, P.E., and Chen, J.-G. (2024). Ribozyme-based biosensor for imaging gene expression in plants. bioRxiv, 2024\u201309.<\/div>\n
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14. Attar, N., Campos, O.A., Vogelauer, M., Cheng, C., Xue, Y., Schmollinger, S., Salwinski, L., Mallipeddi, N.V., Boone, B.A., and Yen, L. (2020). The histone H3-H4 tetramer is a copper reductase enzyme. Science 369<\/i>, 59\u201364.<\/div>\n
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15. Boone, B.A., Mendoza, C.P., Behrendt, N.J., and Jacobsen, S.E. (2024). \u03b1-Crystalline Domains and Intrinsically Disordered Regions Can Work in Parallel to Induce Accumulation of MBD6 at Chromocenters in Arabidopsis thaliana. Epigenomes 8<\/i>, 33.<\/div>\n<\/div>\n

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1. Liu, Y., Rajput, R., Islam, M.T., Valle, I.D., Yao, T., Agrawal, R., Boone, B.A., Eckert, C.A., Abraham, P.E., and Chen, J. (2025). A split ribozyme system for in vivo plant RNA imaging and genetic engineering. Plant Biotechnology Journal 23, 1640\u20131649. 2. Boone, B.A., Ichino, L., Wang, S., Gardiner, J., Yun, J., Jami-Alahmadi, Y., Sha, […]<\/p>\n","protected":false},"author":3413,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"","_et_gb_content_width":"","footnotes":""},"class_list":["post-351","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/affiliate.wcu.edu\/boonelab\/wp-json\/wp\/v2\/pages\/351","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/affiliate.wcu.edu\/boonelab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/affiliate.wcu.edu\/boonelab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/affiliate.wcu.edu\/boonelab\/wp-json\/wp\/v2\/users\/3413"}],"replies":[{"embeddable":true,"href":"https:\/\/affiliate.wcu.edu\/boonelab\/wp-json\/wp\/v2\/comments?post=351"}],"version-history":[{"count":5,"href":"https:\/\/affiliate.wcu.edu\/boonelab\/wp-json\/wp\/v2\/pages\/351\/revisions"}],"predecessor-version":[{"id":458,"href":"https:\/\/affiliate.wcu.edu\/boonelab\/wp-json\/wp\/v2\/pages\/351\/revisions\/458"}],"wp:attachment":[{"href":"https:\/\/affiliate.wcu.edu\/boonelab\/wp-json\/wp\/v2\/media?parent=351"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}